BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034A06LP1|AL429835
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig275 724 0.0
>3x_Contig275
Length = 1611
Score = 724 bits (365), Expect = 0.0
Identities = 386/393 (98%)
Strand = Plus / Plus
Query: 495 ggtacttgcaatgataatgagttactgcaactaccatttgatctcttgcaggaagaaggt 554
|||| ||| ||||||||||||||| || || || |||||||||||||||||||||||||
Sbjct: 411 ggtaattgaaatgataatgagttaatgaaaataaaatttgatctcttgcaggaagaaggt 470
Query: 555 ttattgttcttgtgggtaaccggccgtgctatcgaagtagggaaagaatcattgcagaat 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ttattgttcttgtgggtaaccggccgtgctatcgaagtagggaaagaatcattgcagaat 530
Query: 615 tggggttacgaagtaataaatgaaatatcttggatcaagacaaaccaattaggaagaaca 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tggggttacgaagtaataaatgaaatatcttggatcaagacaaaccaattaggaagaaca 590
Query: 675 attgtgacaggtagaactggccattggttgaaccacagtaaagagcatttactcgtcggg 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 attgtgacaggtagaactggccattggttgaaccacagtaaagagcatttactcgtcggg 650
Query: 735 gtcaaaggcaatccggaatggctaaacagaaaaatagacattgacttgatcattagcgca 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gtcaaaggcaatccggaatggctaaacagaaaaatagacattgacttgatcattagcgca 710
Query: 795 actagagaaaccagtagaaagccggacgaattgtatggaatcattgaaagacttgtcggt 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 actagagaaaccagtagaaagccggacgaattgtatggaatcattgaaagacttgtcggt 770
Query: 855 acacatgcccgtaaacttgaaattttcggtagg 887
|||||||||||||||||||||||||||||||||
Sbjct: 771 acacatgcccgtaaacttgaaattttcggtagg 803
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7390
Number of Sequences: 1807
Number of extensions: 7390
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)